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Cluster: KY005_56_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46280 k141_46280_1 2 1090 + GH94
TF k141_46280 k141_46280_2 1166 1861 + Trans_reg_C
STP k141_46280 k141_46280_3 1827 2303 - NUDIX
CAZyme k141_46280 k141_46280_4 2518 3720 + GH27
NULL(UNKNOWN) k141_46280 k141_46280_5 3721 3924 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_46280 k141_46280_6 3934 5364 + GH26
TC k141_46280 k141_46280_7 5461 6081 - 3.A.1.25.2
CAZyme k141_46280 k141_46280_8 6166 7299 - GT4
Gene ID: k141_46280_1
Type: CAZyme
Location: 2 - 1090 (+)
Gene ID: k141_46280_2
Type: TF
Location: 1166 - 1861 (+)
Gene ID: k141_46280_3
Type: STP
Location: 1827 - 2303 (-)
Gene ID: k141_46280_4
Type: CAZyme
Location: 2518 - 3720 (+)
Gene ID: k141_46280_5
Type:
Location: 3721 - 3924 (+)
Gene ID: k141_46280_6
Type: CAZyme
Location: 3934 - 5364 (+)
Gene ID: k141_46280_7
Type: TC
Location: 5461 - 6081 (-)
Gene ID: k141_46280_8
Type: CAZyme
Location: 6166 - 7299 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_46280_5 vegetarian > vegan 1.18053 0.04247
k141_46280_8 vegetarian > vegan 1.17133 0.04247

🧭 Explore Read Mapping of CGC

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