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Cluster: KY005_56_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_205005 k141_205005_21 23777 24574 + 3.A.1.134.4
TC k141_205005 k141_205005_22 24571 26580 + 3.A.1.134.9
STP k141_205005 k141_205005_23 26641 27957 - Citrate_synt
TF k141_205005 k141_205005_24 27981 28430 - MarR
CAZyme k141_205005 k141_205005_25 28554 29231 + GT51
pfam k141_205005 k141_205005_26 29324 30313 + Lipase_GDSL | Lipase_GDSL_2
pfam k141_205005 k141_205005_27 30410 31018 + Hydrolase | HAD
TC k141_205005 k141_205005_28 31218 33029 + 9.B.34.1.2
Gene ID: k141_205005_21
Type: TC
Location: 23777 - 24574 (+)
Gene ID: k141_205005_22
Type: TC
Location: 24571 - 26580 (+)
Gene ID: k141_205005_23
Type: STP
Location: 26641 - 27957 (-)
Gene ID: k141_205005_24
Type: TF
Location: 27981 - 28430 (-)
Gene ID: k141_205005_25
Type: CAZyme
Location: 28554 - 29231 (+)
Gene ID: k141_205005_26
Type: pfam
Location: 29324 - 30313 (+)
Gene ID: k141_205005_27
Type: pfam
Location: 30410 - 31018 (+)
Gene ID: k141_205005_28
Type: TC
Location: 31218 - 33029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_205005_21 vegetarian > vegan 1.43100 0.03778
k141_205005_27 vegetarian > vegan 1.12814 0.04247

🧭 Explore Read Mapping of CGC

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