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Cluster: KY002_56_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_76366 k141_76366_22 24398 25777 - 9.B.34.1.2
pfam k141_76366 k141_76366_23 25853 27220 - GD_AH_second | GD_AH_C
pfam k141_76366 k141_76366_24 27210 28463 - Mannitol_dh | Mannitol_dh_C
CAZyme k141_76366 k141_76366_25 28588 29979 - GH4
CAZyme k141_76366 k141_76366_26 30165 32672 + GH106
TF k141_76366 k141_76366_27 32691 33491 + HTH_AraC | HTH_AraC
TC k141_76366 k141_76366_28 33691 34023 - 2.A.78.1.1
TC k141_76366 k141_76366_29 34251 34922 - 2.A.78.1.1
Gene ID: k141_76366_22
Type: TC
Location: 24398 - 25777 (-)
Gene ID: k141_76366_23
Type: pfam
Location: 25853 - 27220 (-)
Gene ID: k141_76366_24
Type: pfam
Location: 27210 - 28463 (-)
Gene ID: k141_76366_25
Type: CAZyme
Location: 28588 - 29979 (-)
Gene ID: k141_76366_26
Type: CAZyme
Location: 30165 - 32672 (+)
Gene ID: k141_76366_27
Type: TF
Location: 32691 - 33491 (+)
Gene ID: k141_76366_28
Type: TC
Location: 33691 - 34023 (-)
Gene ID: k141_76366_29
Type: TC
Location: 34251 - 34922 (-)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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