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Cluster: KY002_56_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_98452 k141_98452_39 41372 43036 + 8.A.7.1.1
NULL(UNKNOWN) k141_98452 k141_98452_40 43139 43810 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_98452 k141_98452_41 43842 44573 + Sigma70_r2 | Sigma70_r4
TC k141_98452 k141_98452_42 44864 46597 + 3.A.1.135.5
TC k141_98452 k141_98452_43 46594 48309 + 3.A.1.135.5
CAZyme k141_98452 k141_98452_44 49049 50143 + GH181
TF k141_98452 k141_98452_45 50341 52611 - HTH_AraC
STP k141_98452 k141_98452_46 53082 54494 + SBP_bac_1
TC k141_98452 k141_98452_47 54521 55423 + 3.A.1.1.20
TC k141_98452 k141_98452_48 55437 56336 + 3.A.1.1.39
Gene ID: k141_98452_39
Type: TC
Location: 41372 - 43036 (+)
Gene ID: k141_98452_40
Type:
Location: 43139 - 43810 (+)
Gene ID: k141_98452_41
Type: STP
Location: 43842 - 44573 (+)
Gene ID: k141_98452_42
Type: TC
Location: 44864 - 46597 (+)
Gene ID: k141_98452_43
Type: TC
Location: 46594 - 48309 (+)
Gene ID: k141_98452_44
Type: CAZyme
Location: 49049 - 50143 (+)
Gene ID: k141_98452_45
Type: TF
Location: 50341 - 52611 (-)
Gene ID: k141_98452_46
Type: STP
Location: 53082 - 54494 (+)
Gene ID: k141_98452_47
Type: TC
Location: 54521 - 55423 (+)
Gene ID: k141_98452_48
Type: TC
Location: 55437 - 56336 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
CAKSQL01
→
Species
CAKSQL01 sp934486735

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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