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Cluster: KY002_56_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_270059 k141_270059_15 20530 24435 + GH87
CAZyme k141_270059 k141_270059_16 24453 27698 + CBM9 | GH87
pfam k141_270059 k141_270059_17 27944 28318 + Recombinase
NULL(UNKNOWN) k141_270059 k141_270059_18 28661 29692 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_270059 k141_270059_19 29711 31204 - 2.A.50.2.1
TF k141_270059 k141_270059_20 31648 32394 + HTH_AraC
TF k141_270059 k141_270059_21 32403 33239 - HTH_AraC
CAZyme k141_270059 k141_270059_22 33391 34707 + GH4
Gene ID: k141_270059_15
Type: CAZyme
Location: 20530 - 24435 (+)
Gene ID: k141_270059_16
Type: CAZyme
Location: 24453 - 27698 (+)
Gene ID: k141_270059_17
Type: pfam
Location: 27944 - 28318 (+)
Gene ID: k141_270059_18
Type:
Location: 28661 - 29692 (-)
Gene ID: k141_270059_19
Type: TC
Location: 29711 - 31204 (-)
Gene ID: k141_270059_20
Type: TF
Location: 31648 - 32394 (+)
Gene ID: k141_270059_21
Type: TF
Location: 32403 - 33239 (-)
Gene ID: k141_270059_22
Type: CAZyme
Location: 33391 - 34707 (+)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA1381

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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