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Cluster: KY001_26_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_199601 k141_199601_38 37668 38549 + 3.A.1.15.4
TC k141_199601 k141_199601_39 38549 39445 + 3.A.1.15.4
TC k141_199601 k141_199601_40 39449 40300 + 3.A.1.15.4
TC k141_199601 k141_199601_41 40293 41126 + 3.A.1.15.4
pfam k141_199601 k141_199601_42 41161 42333 - MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
CAZyme k141_199601 k141_199601_43 42330 43373 - GH3
Gene ID: k141_199601_38
Type: TC
Location: 37668 - 38549 (+)
Gene ID: k141_199601_39
Type: TC
Location: 38549 - 39445 (+)
Gene ID: k141_199601_40
Type: TC
Location: 39449 - 40300 (+)
Gene ID: k141_199601_41
Type: TC
Location: 40293 - 41126 (+)
Gene ID: k141_199601_42
Type: pfam
Location: 41161 - 42333 (-)
Gene ID: k141_199601_43
Type: CAZyme
Location: 42330 - 43373 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_199601_40 vegan > omnivore 2.20848 0.00918
k141_199601_40 vegetarian > omnivore 1.64996 0.00878
k141_199601_41 vegan > omnivore 2.08420 0.00918
k141_199601_41 vegetarian > omnivore 1.17773 0.00878
k141_199601_42 vegan > omnivore 1.20096 0.00918
k141_199601_42 vegetarian > omnivore 1.06294 0.00878

🧭 Explore Read Mapping of CGC

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