Cluster: KY001_26_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: KY001_26
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_200888 | k141_200888_4 | 3122 | 3937 | + | GT2 |
| TC | k141_200888 | k141_200888_5 | 3934 | 5310 | + | 2.A.38.1.1 |
| TC | k141_200888 | k141_200888_6 | 5389 | 5775 | + | 1.A.22.1.1 |
Gene ID: k141_200888_4
Type: CAZyme
Location: 3122 - 3937 (+)
Type: CAZyme
Location: 3122 - 3937 (+)
Gene ID: k141_200888_5
Type: TC
Location: 3934 - 5310 (+)
Type: TC
Location: 3934 - 5310 (+)
Gene ID: k141_200888_6
Type: TC
Location: 5389 - 5775 (+)
Type: TC
Location: 5389 - 5775 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp927911595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_200888_4 | vegan > omnivore | 1.57659 | 0.00918 |
| k141_200888_5 | vegetarian > omnivore | 1.31871 | 0.00878 |
| k141_200888_6 | vegan > omnivore | 1.70653 | 0.00918 |
| k141_200888_6 | vegetarian > omnivore | 2.92886 | 0.00878 |