Cluster: KY001_26_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: KY001_26
- CGC Family ID: CGCFAM_01420
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_134265 | k141_134265_90 | 89530 | 90021 | - | 9.B.105.1.1 |
| pfam | k141_134265 | k141_134265_91 | 90138 | 91508 | - | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2 |
| NULL(UNKNOWN) | k141_134265 | k141_134265_92 | 91622 | 93370 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_134265 | k141_134265_93 | 93371 | 95083 | - | 1.A.33.1.4 |
| peptidase | k141_134265 | k141_134265_94 | 95466 | 97103 | + | C26.964 |
| CAZyme | k141_134265 | k141_134265_95 | 97225 | 98160 | + | GT2 |
Gene ID: k141_134265_90
Type: TC
Location: 89530 - 90021 (-)
Type: TC
Location: 89530 - 90021 (-)
Gene ID: k141_134265_91
Type: pfam
Location: 90138 - 91508 (-)
Type: pfam
Location: 90138 - 91508 (-)
Gene ID: k141_134265_92
Type:
Location: 91622 - 93370 (-)
Type:
Location: 91622 - 93370 (-)
Gene ID: k141_134265_93
Type: TC
Location: 93371 - 95083 (-)
Type: TC
Location: 93371 - 95083 (-)
Gene ID: k141_134265_94
Type: peptidase
Location: 95466 - 97103 (+)
Type: peptidase
Location: 95466 - 97103 (+)
Gene ID: k141_134265_95
Type: CAZyme
Location: 97225 - 98160 (+)
Type: CAZyme
Location: 97225 - 98160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp927911595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_134265_90 | vegan > omnivore | 1.12122 | 0.00918 |
| k141_134265_90 | vegetarian > omnivore | 1.06492 | 0.00878 |