Cluster: KY001_26_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: KY001_26
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_134265 | k141_134265_35 | 32333 | 34177 | - | 3.A.1.106.2 |
| TF | k141_134265 | k141_134265_36 | 34254 | 35144 | - | HTH_AraC | HTH_AraC |
| pfam | k141_134265 | k141_134265_37 | 35248 | 35592 | + | CMD |
| CAZyme | k141_134265 | k141_134265_38 | 35664 | 36719 | - | GT9 |
Gene ID: k141_134265_35
Type: TC
Location: 32333 - 34177 (-)
Type: TC
Location: 32333 - 34177 (-)
Gene ID: k141_134265_36
Type: TF
Location: 34254 - 35144 (-)
Type: TF
Location: 34254 - 35144 (-)
Gene ID: k141_134265_37
Type: pfam
Location: 35248 - 35592 (+)
Type: pfam
Location: 35248 - 35592 (+)
Gene ID: k141_134265_38
Type: CAZyme
Location: 35664 - 36719 (-)
Type: CAZyme
Location: 35664 - 36719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp927911595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_134265_36 | vegetarian > vegan | 1.23045 | 0.02445 |
| k141_134265_37 | vegan > omnivore | 1.15710 | 0.00918 |
| k141_134265_37 | vegetarian > omnivore | 1.49418 | 0.00878 |
| k141_134265_38 | vegetarian > omnivore | 1.02033 | 0.00878 |
| k141_134265_38 | vegetarian > vegan | 1.25192 | 0.03280 |