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Cluster: KY001_26_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_117484 k141_117484_76 83574 84983 + 2.A.1.3.51
TC k141_117484 k141_117484_77 85117 86763 + 3.A.1.5.27
pfam k141_117484 k141_117484_78 86830 87462 + PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
CAZyme k141_117484 k141_117484_79 87538 88644 - GH177
pfam k141_117484 k141_117484_80 88655 89728 - GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
TF k141_117484 k141_117484_81 89718 90428 - GntR
TC k141_117484 k141_117484_82 90603 91829 + 2.A.1.12.1
TC k141_117484 k141_117484_83 91985 93370 + 2.A.47.5.2
Gene ID: k141_117484_76
Type: TC
Location: 83574 - 84983 (+)
Gene ID: k141_117484_77
Type: TC
Location: 85117 - 86763 (+)
Gene ID: k141_117484_78
Type: pfam
Location: 86830 - 87462 (+)
Gene ID: k141_117484_79
Type: CAZyme
Location: 87538 - 88644 (-)
Gene ID: k141_117484_80
Type: pfam
Location: 88655 - 89728 (-)
Gene ID: k141_117484_81
Type: TF
Location: 89718 - 90428 (-)
Gene ID: k141_117484_82
Type: TC
Location: 90603 - 91829 (+)
Gene ID: k141_117484_83
Type: TC
Location: 91985 - 93370 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_117484_77 vegan > omnivore 1.20540 0.00918
k141_117484_78 vegetarian > omnivore 1.00609 0.00878

🧭 Explore Read Mapping of CGC

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