Cluster: KY001_26_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: KY001_26
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_187715 | k141_187715_64 | 70442 | 72346 | + | 2.A.37.1.2 |
| pfam | k141_187715 | k141_187715_65 | 72382 | 74517 | - | UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st |
| TC | k141_187715 | k141_187715_66 | 74810 | 75796 | - | 3.A.1.15.5 |
| pfam | k141_187715 | k141_187715_67 | 75964 | 76725 | - | ThiF |
| CAZyme | k141_187715 | k141_187715_68 | 76725 | 77852 | - | GH102 |
Gene ID: k141_187715_64
Type: TC
Location: 70442 - 72346 (+)
Type: TC
Location: 70442 - 72346 (+)
Gene ID: k141_187715_65
Type: pfam
Location: 72382 - 74517 (-)
Type: pfam
Location: 72382 - 74517 (-)
Gene ID: k141_187715_66
Type: TC
Location: 74810 - 75796 (-)
Type: TC
Location: 74810 - 75796 (-)
Gene ID: k141_187715_67
Type: pfam
Location: 75964 - 76725 (-)
Type: pfam
Location: 75964 - 76725 (-)
Gene ID: k141_187715_68
Type: CAZyme
Location: 76725 - 77852 (-)
Type: CAZyme
Location: 76725 - 77852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp927911595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_187715_64 | vegetarian > omnivore | 1.05796 | 0.00878 |
| k141_187715_65 | vegan > omnivore | 1.35802 | 0.00918 |
| k141_187715_65 | vegetarian > omnivore | 1.33723 | 0.00878 |
| k141_187715_66 | vegan > omnivore | 1.04106 | 0.00918 |
| k141_187715_67 | vegan > omnivore | 1.41172 | 0.00918 |
| k141_187715_67 | vegetarian > omnivore | 1.51691 | 0.00878 |
| k141_187715_68 | vegetarian > omnivore | 1.06241 | 0.00878 |