Cluster: KY001_26_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: KY001_26
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_178003 | k141_178003_6 | 4212 | 4517 | + | 9.B.21.2.1 |
| TC | k141_178003 | k141_178003_7 | 4517 | 6382 | + | 2.A.16.2.2 |
| pfam | k141_178003 | k141_178003_8 | 6425 | 7966 | - | PFL-like | YjjI-like |
| TC | k141_178003 | k141_178003_9 | 8124 | 8822 | + | 2.A.115.2.7 |
| CAZyme | k141_178003 | k141_178003_10 | 8772 | 9800 | - | GT9 |
Gene ID: k141_178003_6
Type: TC
Location: 4212 - 4517 (+)
Type: TC
Location: 4212 - 4517 (+)
Gene ID: k141_178003_7
Type: TC
Location: 4517 - 6382 (+)
Type: TC
Location: 4517 - 6382 (+)
Gene ID: k141_178003_8
Type: pfam
Location: 6425 - 7966 (-)
Type: pfam
Location: 6425 - 7966 (-)
Gene ID: k141_178003_9
Type: TC
Location: 8124 - 8822 (+)
Type: TC
Location: 8124 - 8822 (+)
Gene ID: k141_178003_10
Type: CAZyme
Location: 8772 - 9800 (-)
Type: CAZyme
Location: 8772 - 9800 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp927911595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_178003_9 | vegan > omnivore | 1.18266 | 0.00918 |
| k141_178003_9 | vegetarian > omnivore | 1.39035 | 0.00878 |
| k141_178003_10 | vegan > omnivore | 1.36714 | 0.00918 |
| k141_178003_10 | vegetarian > omnivore | 1.08677 | 0.00878 |