Cluster: HRGMv2_4823_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4823
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4823_43 | HRGMv2_4823_43_3 | 1359 | 2384 | + | GT9 |
| pfam | HRGMv2_4823_43 | HRGMv2_4823_43_4 | 2384 | 2848 | + | ATP-cone | Zn_ribbon_NrdR |
| pfam | HRGMv2_4823_43 | HRGMv2_4823_43_5 | 2838 | 3275 | + | NusB |
| TC | HRGMv2_4823_43 | HRGMv2_4823_43_6 | 3277 | 4017 | + | 1.B.33.1.3 |
Gene ID: HRGMv2_4823_43_3
Type: CAZyme
Location: 1359 - 2384 (+)
Type: CAZyme
Location: 1359 - 2384 (+)
Gene ID: HRGMv2_4823_43_4
Type: pfam
Location: 2384 - 2848 (+)
Type: pfam
Location: 2384 - 2848 (+)
Gene ID: HRGMv2_4823_43_5
Type: pfam
Location: 2838 - 3275 (+)
Type: pfam
Location: 2838 - 3275 (+)
Gene ID: HRGMv2_4823_43_6
Type: TC
Location: 3277 - 4017 (+)
Type: TC
Location: 3277 - 4017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
UBA9339
Family
UBA9339
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.