Cluster: HRGMv2_4823_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4823
- CGC Family ID: CGCFAM_00568
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4823_18 | HRGMv2_4823_18_4 | 3558 | 4790 | + | GT19 |
| pfam | HRGMv2_4823_18 | HRGMv2_4823_18_5 | 4787 | 8260 | - | tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger |
| TC | HRGMv2_4823_18 | HRGMv2_4823_18_6 | 8329 | 9126 | + | 2.A.7.3.1 |
Gene ID: HRGMv2_4823_18_4
Type: CAZyme
Location: 3558 - 4790 (+)
Type: CAZyme
Location: 3558 - 4790 (+)
Gene ID: HRGMv2_4823_18_5
Type: pfam
Location: 4787 - 8260 (-)
Type: pfam
Location: 4787 - 8260 (-)
Gene ID: HRGMv2_4823_18_6
Type: TC
Location: 8329 - 9126 (+)
Type: TC
Location: 8329 - 9126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
UBA9339
Family
UBA9339
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.