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Cluster: HRGMv2_4820_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4820_68 HRGMv2_4820_68_6 5226 6197 + 2.A.7.28.11
CAZyme HRGMv2_4820_68 HRGMv2_4820_68_7 6139 8331 - GH23
pfam HRGMv2_4820_68 HRGMv2_4820_68_8 8436 9311 + DHDPS
TC HRGMv2_4820_68 HRGMv2_4820_68_9 9363 9737 - 2.A.63.1.2
TC HRGMv2_4820_68 HRGMv2_4820_68_10 9747 10016 - 2.A.63.1.1
TC HRGMv2_4820_68 HRGMv2_4820_68_11 10013 10504 - 2.A.63.1.2
TC HRGMv2_4820_68 HRGMv2_4820_68_12 10501 12084 - 2.A.63.1.1
TC HRGMv2_4820_68 HRGMv2_4820_68_13 12081 12443 - 2.A.63.1.1
TC HRGMv2_4820_68 HRGMv2_4820_68_14 12443 15268 - 2.A.63.1.1
Gene ID: HRGMv2_4820_68_6
Type: TC
Location: 5226 - 6197 (+)
Gene ID: HRGMv2_4820_68_7
Type: CAZyme
Location: 6139 - 8331 (-)
Gene ID: HRGMv2_4820_68_8
Type: pfam
Location: 8436 - 9311 (+)
Gene ID: HRGMv2_4820_68_9
Type: TC
Location: 9363 - 9737 (-)
Gene ID: HRGMv2_4820_68_10
Type: TC
Location: 9747 - 10016 (-)
Gene ID: HRGMv2_4820_68_11
Type: TC
Location: 10013 - 10504 (-)
Gene ID: HRGMv2_4820_68_12
Type: TC
Location: 10501 - 12084 (-)
Gene ID: HRGMv2_4820_68_13
Type: TC
Location: 12081 - 12443 (-)
Gene ID: HRGMv2_4820_68_14
Type: TC
Location: 12443 - 15268 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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