Cluster: HRGMv2_4820_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4820
- CGC Family ID: CGCFAM_08888
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4820_58 | HRGMv2_4820_58_7 | 4557 | 5504 | - | 2.A.102.4.5 |
| pfam | HRGMv2_4820_58 | HRGMv2_4820_58_8 | 5689 | 6480 | + | SurE |
| pfam | HRGMv2_4820_58 | HRGMv2_4820_58_9 | 6484 | 7149 | + | PCMT | Methyltransf_11 | Methyltransf_25 |
| CAZyme | HRGMv2_4820_58 | HRGMv2_4820_58_10 | 7181 | 8356 | + | CBM50 | CBM50 |
Gene ID: HRGMv2_4820_58_7
Type: TC
Location: 4557 - 5504 (-)
Type: TC
Location: 4557 - 5504 (-)
Gene ID: HRGMv2_4820_58_8
Type: pfam
Location: 5689 - 6480 (+)
Type: pfam
Location: 5689 - 6480 (+)
Gene ID: HRGMv2_4820_58_9
Type: pfam
Location: 6484 - 7149 (+)
Type: pfam
Location: 6484 - 7149 (+)
Gene ID: HRGMv2_4820_58_10
Type: CAZyme
Location: 7181 - 8356 (+)
Type: CAZyme
Location: 7181 - 8356 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Rhodobacteraceae
Genus
Paracoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.