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Cluster: HRGMv2_4820_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4820_39 HRGMv2_4820_39_1 2 961 - 2.A.63.1.1
pfam HRGMv2_4820_39 HRGMv2_4820_39_2 1132 2385 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam HRGMv2_4820_39 HRGMv2_4820_39_3 2366 2602 - PP-binding
TC HRGMv2_4820_39 HRGMv2_4820_39_4 2628 4196 - 4.C.1.1.7
pfam HRGMv2_4820_39 HRGMv2_4820_39_5 4193 4729 - Hexapep | Hexapep_2 | Hexapep_2
pfam HRGMv2_4820_39 HRGMv2_4820_39_6 4796 5869 - Glyco_transf_61
CAZyme HRGMv2_4820_39 HRGMv2_4820_39_7 5930 7096 - CE2
pfam HRGMv2_4820_39 HRGMv2_4820_39_8 7222 8088 + Usp | Usp
pfam HRGMv2_4820_39 HRGMv2_4820_39_9 8185 9537 - tRNA-synt_2b | HGTP_anticodon
TC HRGMv2_4820_39 HRGMv2_4820_39_10 9666 10988 + 2.A.86.1.5
Gene ID: HRGMv2_4820_39_1
Type: TC
Location: 2 - 961 (-)
Gene ID: HRGMv2_4820_39_2
Type: pfam
Location: 1132 - 2385 (-)
Gene ID: HRGMv2_4820_39_3
Type: pfam
Location: 2366 - 2602 (-)
Gene ID: HRGMv2_4820_39_4
Type: TC
Location: 2628 - 4196 (-)
Gene ID: HRGMv2_4820_39_5
Type: pfam
Location: 4193 - 4729 (-)
Gene ID: HRGMv2_4820_39_6
Type: pfam
Location: 4796 - 5869 (-)
Gene ID: HRGMv2_4820_39_7
Type: CAZyme
Location: 5930 - 7096 (-)
Gene ID: HRGMv2_4820_39_8
Type: pfam
Location: 7222 - 8088 (+)
Gene ID: HRGMv2_4820_39_9
Type: pfam
Location: 8185 - 9537 (-)
Gene ID: HRGMv2_4820_39_10
Type: TC
Location: 9666 - 10988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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