Cluster: HRGMv2_4819_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4819
- CGC Family ID: CGCFAM_08193
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4819_22 | HRGMv2_4819_22_1 | 2 | 1369 | - | 4.C.1.1.4 |
| TC | HRGMv2_4819_22 | HRGMv2_4819_22_2 | 1383 | 2945 | - | 3.D.10.1.4 |
| pfam | HRGMv2_4819_22 | HRGMv2_4819_22_3 | 3006 | 3497 | - | AHSA1 |
| TF | HRGMv2_4819_22 | HRGMv2_4819_22_4 | 3560 | 3877 | + | HTH_5 |
| CAZyme | HRGMv2_4819_22 | HRGMv2_4819_22_5 | 3938 | 4312 | - | CBM50 |
Gene ID: HRGMv2_4819_22_1
Type: TC
Location: 2 - 1369 (-)
Type: TC
Location: 2 - 1369 (-)
Gene ID: HRGMv2_4819_22_2
Type: TC
Location: 1383 - 2945 (-)
Type: TC
Location: 1383 - 2945 (-)
Gene ID: HRGMv2_4819_22_3
Type: pfam
Location: 3006 - 3497 (-)
Type: pfam
Location: 3006 - 3497 (-)
Gene ID: HRGMv2_4819_22_4
Type: TF
Location: 3560 - 3877 (+)
Type: TF
Location: 3560 - 3877 (+)
Gene ID: HRGMv2_4819_22_5
Type: CAZyme
Location: 3938 - 4312 (-)
Type: CAZyme
Location: 3938 - 4312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Acidobacteriota
Class
Blastocatellia
Order
Pyrinomonadales
Family
Pyrinomonadaceae
Genus
OLB17
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.