Cluster: HRGMv2_4815_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4815
- CGC Family ID: CGCFAM_02417
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_5 | 5760 | 8054 | - | GH20 |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_6 | 8146 | 10728 | - | GH20 |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_7 | 10873 | 12489 | + | AA3_2 |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_8 | 12515 | 13846 | - | GH29 |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_9 | 13912 | 15114 | - | GH27 |
| pfam | HRGMv2_4815_13 | HRGMv2_4815_13_10 | 15192 | 16379 | - | GlcNAc_2-epim |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_11 | 16482 | 17648 | - | GH33 |
| CAZyme | HRGMv2_4815_13 | HRGMv2_4815_13_12 | 17706 | 19286 | - | GH33 |
| TC | HRGMv2_4815_13 | HRGMv2_4815_13_13 | 19300 | 20538 | - | 2.A.1.14.25 |
| pfam | HRGMv2_4815_13 | HRGMv2_4815_13_14 | 20632 | 21801 | - | NANM | NANM |
| pfam | HRGMv2_4815_13 | HRGMv2_4815_13_15 | 21821 | 22741 | - | DHDPS |
| TC | HRGMv2_4815_13 | HRGMv2_4815_13_16 | 22885 | 24501 | - | 8.A.46.1.4 |
| TC | HRGMv2_4815_13 | HRGMv2_4815_13_17 | 24511 | 27789 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_4815_13_5
Type: CAZyme
Location: 5760 - 8054 (-)
Type: CAZyme
Location: 5760 - 8054 (-)
Gene ID: HRGMv2_4815_13_6
Type: CAZyme
Location: 8146 - 10728 (-)
Type: CAZyme
Location: 8146 - 10728 (-)
Gene ID: HRGMv2_4815_13_7
Type: CAZyme
Location: 10873 - 12489 (+)
Type: CAZyme
Location: 10873 - 12489 (+)
Gene ID: HRGMv2_4815_13_8
Type: CAZyme
Location: 12515 - 13846 (-)
Type: CAZyme
Location: 12515 - 13846 (-)
Gene ID: HRGMv2_4815_13_9
Type: CAZyme
Location: 13912 - 15114 (-)
Type: CAZyme
Location: 13912 - 15114 (-)
Gene ID: HRGMv2_4815_13_10
Type: pfam
Location: 15192 - 16379 (-)
Type: pfam
Location: 15192 - 16379 (-)
Gene ID: HRGMv2_4815_13_11
Type: CAZyme
Location: 16482 - 17648 (-)
Type: CAZyme
Location: 16482 - 17648 (-)
Gene ID: HRGMv2_4815_13_12
Type: CAZyme
Location: 17706 - 19286 (-)
Type: CAZyme
Location: 17706 - 19286 (-)
Gene ID: HRGMv2_4815_13_13
Type: TC
Location: 19300 - 20538 (-)
Type: TC
Location: 19300 - 20538 (-)
Gene ID: HRGMv2_4815_13_14
Type: pfam
Location: 20632 - 21801 (-)
Type: pfam
Location: 20632 - 21801 (-)
Gene ID: HRGMv2_4815_13_15
Type: pfam
Location: 21821 - 22741 (-)
Type: pfam
Location: 21821 - 22741 (-)
Gene ID: HRGMv2_4815_13_16
Type: TC
Location: 22885 - 24501 (-)
Type: TC
Location: 22885 - 24501 (-)
Gene ID: HRGMv2_4815_13_17
Type: TC
Location: 24511 - 27789 (-)
Type: TC
Location: 24511 - 27789 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Hanamia
Species
Hanamia sp018268075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.