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Cluster: HRGMv2_4815_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4815_10 HRGMv2_4815_10_40 44651 47779 + GH13_10
STP HRGMv2_4815_10 HRGMv2_4815_10_41 47807 48535 + NUDIX
TC HRGMv2_4815_10 HRGMv2_4815_10_42 48928 51921 + 1.B.14.6.1
TC HRGMv2_4815_10 HRGMv2_4815_10_43 51943 53520 + 8.A.46.1.1
pfam HRGMv2_4815_10 HRGMv2_4815_10_44 53565 54383 + SusE
pfam HRGMv2_4815_10 HRGMv2_4815_10_45 54527 55684 + SusE | SusF_SusE
TC HRGMv2_4815_10 HRGMv2_4815_10_46 55800 56393 + 2.A.95.1.7
Gene ID: HRGMv2_4815_10_40
Type: CAZyme
Location: 44651 - 47779 (+)
Gene ID: HRGMv2_4815_10_41
Type: STP
Location: 47807 - 48535 (+)
Gene ID: HRGMv2_4815_10_42
Type: TC
Location: 48928 - 51921 (+)
Gene ID: HRGMv2_4815_10_43
Type: TC
Location: 51943 - 53520 (+)
Gene ID: HRGMv2_4815_10_44
Type: pfam
Location: 53565 - 54383 (+)
Gene ID: HRGMv2_4815_10_45
Type: pfam
Location: 54527 - 55684 (+)
Gene ID: HRGMv2_4815_10_46
Type: TC
Location: 55800 - 56393 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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