dbCAN Logo

Cluster: HRGMv2_4815_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4815_65 HRGMv2_4815_65_1 2 1114 + GT2
STP HRGMv2_4815_65 HRGMv2_4815_65_2 1341 1757 + Response_reg
TC HRGMv2_4815_65 HRGMv2_4815_65_3 1822 2946 + 9.B.18.1.2
CAZyme HRGMv2_4815_65 HRGMv2_4815_65_4 3065 3979 + GT2
pfam HRGMv2_4815_65 HRGMv2_4815_65_5 4003 5019 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
pfam HRGMv2_4815_65 HRGMv2_4815_65_6 5053 5616 + RrnaAD | MTS | Methyltransf_25
CAZyme HRGMv2_4815_65 HRGMv2_4815_65_7 5716 6789 + GT4
CAZyme HRGMv2_4815_65 HRGMv2_4815_65_8 6796 8013 + GT2
pfam HRGMv2_4815_65 HRGMv2_4815_65_9 8000 9022 + Polysacc_deac_1
pfam HRGMv2_4815_65 HRGMv2_4815_65_10 9019 10677 - Sulfatase
TC HRGMv2_4815_65 HRGMv2_4815_65_11 10841 13303 - 3.A.12.1.1
Gene ID: HRGMv2_4815_65_1
Type: CAZyme
Location: 2 - 1114 (+)
Gene ID: HRGMv2_4815_65_2
Type: STP
Location: 1341 - 1757 (+)
Gene ID: HRGMv2_4815_65_3
Type: TC
Location: 1822 - 2946 (+)
Gene ID: HRGMv2_4815_65_4
Type: CAZyme
Location: 3065 - 3979 (+)
Gene ID: HRGMv2_4815_65_5
Type: pfam
Location: 4003 - 5019 (+)
Gene ID: HRGMv2_4815_65_6
Type: pfam
Location: 5053 - 5616 (+)
Gene ID: HRGMv2_4815_65_7
Type: CAZyme
Location: 5716 - 6789 (+)
Gene ID: HRGMv2_4815_65_8
Type: CAZyme
Location: 6796 - 8013 (+)
Gene ID: HRGMv2_4815_65_9
Type: pfam
Location: 8000 - 9022 (+)
Gene ID: HRGMv2_4815_65_10
Type: pfam
Location: 9019 - 10677 (-)
Gene ID: HRGMv2_4815_65_11
Type: TC
Location: 10841 - 13303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List