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Cluster: HRGMv2_4815_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4815_29 HRGMv2_4815_29_13 12780 13601 + 3.A.1.103.5
TC HRGMv2_4815_29 HRGMv2_4815_29_14 13601 14803 + 3.A.1.103.5
pfam HRGMv2_4815_29 HRGMv2_4815_29_15 14791 15555 + Methyltransf_11 | Methyltransf_23 | Methyltransf_31
pfam HRGMv2_4815_29 HRGMv2_4815_29_16 15581 16429 + Methyltransf_21
CAZyme HRGMv2_4815_29 HRGMv2_4815_29_17 16451 17293 + GT2
CAZyme HRGMv2_4815_29 HRGMv2_4815_29_18 17354 18625 + GT4
CAZyme HRGMv2_4815_29 HRGMv2_4815_29_19 18645 19718 + GT4
peptidase HRGMv2_4815_29 HRGMv2_4815_29_20 19781 21691 + C44.001
CAZyme HRGMv2_4815_29 HRGMv2_4815_29_21 21637 22935 + GT4
Gene ID: HRGMv2_4815_29_13
Type: TC
Location: 12780 - 13601 (+)
Gene ID: HRGMv2_4815_29_14
Type: TC
Location: 13601 - 14803 (+)
Gene ID: HRGMv2_4815_29_15
Type: pfam
Location: 14791 - 15555 (+)
Gene ID: HRGMv2_4815_29_16
Type: pfam
Location: 15581 - 16429 (+)
Gene ID: HRGMv2_4815_29_17
Type: CAZyme
Location: 16451 - 17293 (+)
Gene ID: HRGMv2_4815_29_18
Type: CAZyme
Location: 17354 - 18625 (+)
Gene ID: HRGMv2_4815_29_19
Type: CAZyme
Location: 18645 - 19718 (+)
Gene ID: HRGMv2_4815_29_20
Type: peptidase
Location: 19781 - 21691 (+)
Gene ID: HRGMv2_4815_29_21
Type: CAZyme
Location: 21637 - 22935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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