Cluster: HRGMv2_4815_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4815
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4815_1 | HRGMv2_4815_1_11 | 13280 | 16453 | + | 1.B.14.6.1 |
| TC | HRGMv2_4815_1 | HRGMv2_4815_1_12 | 16547 | 18004 | + | 8.A.46.1.5 |
| pfam | HRGMv2_4815_1 | HRGMv2_4815_1_13 | 18130 | 18783 | - | SCO1-SenC |
| CAZyme | HRGMv2_4815_1 | HRGMv2_4815_1_14 | 18942 | 19709 | - | GH25 |
| peptidase | HRGMv2_4815_1 | HRGMv2_4815_1_15 | 20023 | 21954 | - | M01.UPW |
| CAZyme | HRGMv2_4815_1 | HRGMv2_4815_1_16 | 22148 | 22972 | + | GH23 |
Gene ID: HRGMv2_4815_1_11
Type: TC
Location: 13280 - 16453 (+)
Type: TC
Location: 13280 - 16453 (+)
Gene ID: HRGMv2_4815_1_12
Type: TC
Location: 16547 - 18004 (+)
Type: TC
Location: 16547 - 18004 (+)
Gene ID: HRGMv2_4815_1_13
Type: pfam
Location: 18130 - 18783 (-)
Type: pfam
Location: 18130 - 18783 (-)
Gene ID: HRGMv2_4815_1_14
Type: CAZyme
Location: 18942 - 19709 (-)
Type: CAZyme
Location: 18942 - 19709 (-)
Gene ID: HRGMv2_4815_1_15
Type: peptidase
Location: 20023 - 21954 (-)
Type: peptidase
Location: 20023 - 21954 (-)
Gene ID: HRGMv2_4815_1_16
Type: CAZyme
Location: 22148 - 22972 (+)
Type: CAZyme
Location: 22148 - 22972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Hanamia
Species
Hanamia sp018268075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.