Cluster: HRGMv2_4807_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4807
- CGC Family ID: CGCFAM_08899
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4807_16 | HRGMv2_4807_16_7 | 4944 | 6062 | + | GT4 |
| pfam | HRGMv2_4807_16 | HRGMv2_4807_16_8 | 6070 | 7377 | + | Wzy_C |
| pfam | HRGMv2_4807_16 | HRGMv2_4807_16_9 | 7365 | 8291 | - | Lip_A_acyltrans |
| CAZyme | HRGMv2_4807_16 | HRGMv2_4807_16_10 | 8306 | 9637 | + | GT30 |
| TC | HRGMv2_4807_16 | HRGMv2_4807_16_11 | 9653 | 10981 | - | 2.A.6.2.27 |
Gene ID: HRGMv2_4807_16_7
Type: CAZyme
Location: 4944 - 6062 (+)
Type: CAZyme
Location: 4944 - 6062 (+)
Gene ID: HRGMv2_4807_16_8
Type: pfam
Location: 6070 - 7377 (+)
Type: pfam
Location: 6070 - 7377 (+)
Gene ID: HRGMv2_4807_16_9
Type: pfam
Location: 7365 - 8291 (-)
Type: pfam
Location: 7365 - 8291 (-)
Gene ID: HRGMv2_4807_16_10
Type: CAZyme
Location: 8306 - 9637 (+)
Type: CAZyme
Location: 8306 - 9637 (+)
Gene ID: HRGMv2_4807_16_11
Type: TC
Location: 9653 - 10981 (-)
Type: TC
Location: 9653 - 10981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.