Cluster: HRGMv2_4807_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4807
- CGC Family ID: CGCFAM_08334
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4807_14 | HRGMv2_4807_14_34 | 38564 | 39913 | - | 2.A.12.1.18 |
| CAZyme | HRGMv2_4807_14 | HRGMv2_4807_14_35 | 40037 | 41641 | + | AA3_2 |
| NULL(UNKNOWN) | HRGMv2_4807_14 | HRGMv2_4807_14_36 | 41712 | 42287 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4807_14 | HRGMv2_4807_14_37 | 42342 | 44228 | - | 9.B.1.1.6 |
Gene ID: HRGMv2_4807_14_34
Type: TC
Location: 38564 - 39913 (-)
Type: TC
Location: 38564 - 39913 (-)
Gene ID: HRGMv2_4807_14_35
Type: CAZyme
Location: 40037 - 41641 (+)
Type: CAZyme
Location: 40037 - 41641 (+)
Gene ID: HRGMv2_4807_14_36
Type:
Location: 41712 - 42287 (-)
Type:
Location: 41712 - 42287 (-)
Gene ID: HRGMv2_4807_14_37
Type: TC
Location: 42342 - 44228 (-)
Type: TC
Location: 42342 - 44228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.