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Cluster: HRGMv2_4807_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4807_14 HRGMv2_4807_14_5 6534 7178 + 1.C.113.1.1
NULL(UNKNOWN) HRGMv2_4807_14 HRGMv2_4807_14_6 7067 7348 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4807_14 HRGMv2_4807_14_7 7410 7667 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4807_14 HRGMv2_4807_14_8 7835 9730 + 9.B.121.1.1
STP HRGMv2_4807_14 HRGMv2_4807_14_9 10525 10953 - CBS | CBS
CAZyme HRGMv2_4807_14 HRGMv2_4807_14_10 10913 11926 - GT2
CAZyme HRGMv2_4807_14 HRGMv2_4807_14_11 11970 12758 - GT51
pfam HRGMv2_4807_14 HRGMv2_4807_14_12 12806 13741 + HSP33
NULL(UNKNOWN) HRGMv2_4807_14 HRGMv2_4807_14_13 13850 14710 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4807_14 HRGMv2_4807_14_14 14854 17796 + 1.B.14.6.11
Gene ID: HRGMv2_4807_14_5
Type: TC
Location: 6534 - 7178 (+)
Gene ID: HRGMv2_4807_14_6
Type:
Location: 7067 - 7348 (-)
Gene ID: HRGMv2_4807_14_7
Type:
Location: 7410 - 7667 (+)
Gene ID: HRGMv2_4807_14_8
Type: TC
Location: 7835 - 9730 (+)
Gene ID: HRGMv2_4807_14_9
Type: STP
Location: 10525 - 10953 (-)
Gene ID: HRGMv2_4807_14_10
Type: CAZyme
Location: 10913 - 11926 (-)
Gene ID: HRGMv2_4807_14_11
Type: CAZyme
Location: 11970 - 12758 (-)
Gene ID: HRGMv2_4807_14_12
Type: pfam
Location: 12806 - 13741 (+)
Gene ID: HRGMv2_4807_14_13
Type:
Location: 13850 - 14710 (+)
Gene ID: HRGMv2_4807_14_14
Type: TC
Location: 14854 - 17796 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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