Cluster: HRGMv2_4807_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4807
- CGC Family ID: CGCFAM_00105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4807_7 | HRGMv2_4807_7_7 | 5073 | 8795 | + | GT2 |
| pfam | HRGMv2_4807_7 | HRGMv2_4807_7_8 | 8821 | 9591 | + | Sulfotransfer_2 |
| TC | HRGMv2_4807_7 | HRGMv2_4807_7_9 | 9614 | 10687 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_4807_7_7
Type: CAZyme
Location: 5073 - 8795 (+)
Type: CAZyme
Location: 5073 - 8795 (+)
Gene ID: HRGMv2_4807_7_8
Type: pfam
Location: 8821 - 9591 (+)
Type: pfam
Location: 8821 - 9591 (+)
Gene ID: HRGMv2_4807_7_9
Type: TC
Location: 9614 - 10687 (-)
Type: TC
Location: 9614 - 10687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.