Cluster: HRGMv2_4807_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4807_83 | HRGMv2_4807_83_1 | 2 | 1048 | - | GT105 |
| NULL(UNKNOWN) | HRGMv2_4807_83 | HRGMv2_4807_83_2 | 1215 | 3215 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4807_83 | HRGMv2_4807_83_3 | 3301 | 3756 | - | 3.A.15.2.1 |
| TC | HRGMv2_4807_83 | HRGMv2_4807_83_4 | 3979 | 4428 | - | 3.A.15.2.1 |
Gene ID: HRGMv2_4807_83_1
Type: CAZyme
Location: 2 - 1048 (-)
Type: CAZyme
Location: 2 - 1048 (-)
Gene ID: HRGMv2_4807_83_2
Type:
Location: 1215 - 3215 (-)
Type:
Location: 1215 - 3215 (-)
Gene ID: HRGMv2_4807_83_3
Type: TC
Location: 3301 - 3756 (-)
Type: TC
Location: 3301 - 3756 (-)
Gene ID: HRGMv2_4807_83_4
Type: TC
Location: 3979 - 4428 (-)
Type: TC
Location: 3979 - 4428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.