Cluster: HRGMv2_4807_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4807_27 | HRGMv2_4807_27_10 | 7942 | 9189 | - | 2.A.37.4.2 |
| pfam | HRGMv2_4807_27 | HRGMv2_4807_27_11 | 9186 | 10835 | - | FAD_binding_3 | Trp_halogenase | Trp_halogenase | Lycopene_cycl | NAD_binding_8 |
| CAZyme | HRGMv2_4807_27 | HRGMv2_4807_27_12 | 10832 | 11656 | - | GT2 |
Gene ID: HRGMv2_4807_27_10
Type: TC
Location: 7942 - 9189 (-)
Type: TC
Location: 7942 - 9189 (-)
Gene ID: HRGMv2_4807_27_11
Type: pfam
Location: 9186 - 10835 (-)
Type: pfam
Location: 9186 - 10835 (-)
Gene ID: HRGMv2_4807_27_12
Type: CAZyme
Location: 10832 - 11656 (-)
Type: CAZyme
Location: 10832 - 11656 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.