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Cluster: HRGMv2_4807_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4807_1 HRGMv2_4807_1_152 174374 175012 - 1.A.12.3.1
pfam HRGMv2_4807_1 HRGMv2_4807_1_153 175106 175849 - Cytochrom_C1 | Cytochrom_C1
TC HRGMv2_4807_1 HRGMv2_4807_1_154 175842 177113 - 3.D.3.1.1
TC HRGMv2_4807_1 HRGMv2_4807_1_155 177117 177764 - 3.E.2.1.1
CAZyme HRGMv2_4807_1 HRGMv2_4807_1_156 177891 178748 - GH23
pfam HRGMv2_4807_1 HRGMv2_4807_1_157 178973 180367 + UPF0004 | TRAM | Radical_SAM
NULL(UNKNOWN) HRGMv2_4807_1 HRGMv2_4807_1_158 180364 180990 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4807_1 HRGMv2_4807_1_159 180993 182102 - 3.A.1.105.4
TC HRGMv2_4807_1 HRGMv2_4807_1_160 182099 183067 - 3.A.1.105.4
Gene ID: HRGMv2_4807_1_152
Type: TC
Location: 174374 - 175012 (-)
Gene ID: HRGMv2_4807_1_153
Type: pfam
Location: 175106 - 175849 (-)
Gene ID: HRGMv2_4807_1_154
Type: TC
Location: 175842 - 177113 (-)
Gene ID: HRGMv2_4807_1_155
Type: TC
Location: 177117 - 177764 (-)
Gene ID: HRGMv2_4807_1_156
Type: CAZyme
Location: 177891 - 178748 (-)
Gene ID: HRGMv2_4807_1_157
Type: pfam
Location: 178973 - 180367 (+)
Gene ID: HRGMv2_4807_1_158
Type:
Location: 180364 - 180990 (+)
Gene ID: HRGMv2_4807_1_159
Type: TC
Location: 180993 - 182102 (-)
Gene ID: HRGMv2_4807_1_160
Type: TC
Location: 182099 - 183067 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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