Cluster: HRGMv2_4805_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4805
- CGC Family ID: CGCFAM_08294
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4805_20 | HRGMv2_4805_20_1 | 3 | 4190 | + | GH133 | GH13_3 |
| NULL(UNKNOWN) | HRGMv2_4805_20 | HRGMv2_4805_20_2 | 4176 | 4718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4805_20 | HRGMv2_4805_20_3 | 4925 | 6028 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4805_20 | HRGMv2_4805_20_4 | 6105 | 6653 | + | GH23 |
| pfam | HRGMv2_4805_20 | HRGMv2_4805_20_5 | 6643 | 7362 | + | DUF3047 |
| TC | HRGMv2_4805_20 | HRGMv2_4805_20_6 | 7366 | 7992 | + | 2.A.51.1.5 |
| TC | HRGMv2_4805_20 | HRGMv2_4805_20_7 | 7989 | 8615 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_4805_20_1
Type: CAZyme
Location: 3 - 4190 (+)
Type: CAZyme
Location: 3 - 4190 (+)
Gene ID: HRGMv2_4805_20_2
Type:
Location: 4176 - 4718 (-)
Type:
Location: 4176 - 4718 (-)
Gene ID: HRGMv2_4805_20_3
Type:
Location: 4925 - 6028 (+)
Type:
Location: 4925 - 6028 (+)
Gene ID: HRGMv2_4805_20_4
Type: CAZyme
Location: 6105 - 6653 (+)
Type: CAZyme
Location: 6105 - 6653 (+)
Gene ID: HRGMv2_4805_20_5
Type: pfam
Location: 6643 - 7362 (+)
Type: pfam
Location: 6643 - 7362 (+)
Gene ID: HRGMv2_4805_20_6
Type: TC
Location: 7366 - 7992 (+)
Type: TC
Location: 7366 - 7992 (+)
Gene ID: HRGMv2_4805_20_7
Type: TC
Location: 7989 - 8615 (+)
Type: TC
Location: 7989 - 8615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CALXXL01
Species
CALXXL01 sp944392655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.