Cluster: HRGMv2_4805_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4805
- CGC Family ID: CGCFAM_08291
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4805_163 | HRGMv2_4805_163_3 | 678 | 1727 | - | 1.A.30.2.2 |
| pfam | HRGMv2_4805_163 | HRGMv2_4805_163_4 | 1880 | 2881 | + | ROK |
| pfam | HRGMv2_4805_163 | HRGMv2_4805_163_5 | 2891 | 4381 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 |
| CAZyme | HRGMv2_4805_163 | HRGMv2_4805_163_6 | 4401 | 4856 | + | GT30 |
Gene ID: HRGMv2_4805_163_3
Type: TC
Location: 678 - 1727 (-)
Type: TC
Location: 678 - 1727 (-)
Gene ID: HRGMv2_4805_163_4
Type: pfam
Location: 1880 - 2881 (+)
Type: pfam
Location: 1880 - 2881 (+)
Gene ID: HRGMv2_4805_163_5
Type: pfam
Location: 2891 - 4381 (+)
Type: pfam
Location: 2891 - 4381 (+)
Gene ID: HRGMv2_4805_163_6
Type: CAZyme
Location: 4401 - 4856 (+)
Type: CAZyme
Location: 4401 - 4856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CALXXL01
Species
CALXXL01 sp944392655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.