Cluster: HRGMv2_4799_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4799
- CGC Family ID: CGCFAM_03088
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4799_2 | HRGMv2_4799_2_191 | 236120 | 238336 | + | CE4 | CE4 |
| NULL(UNKNOWN) | HRGMv2_4799_2 | HRGMv2_4799_2_192 | 238398 | 240041 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4799_2 | HRGMv2_4799_2_193 | 240063 | 241451 | + | AAA |
| TC | HRGMv2_4799_2 | HRGMv2_4799_2_194 | 241464 | 242267 | + | 2.A.5.5.5 |
Gene ID: HRGMv2_4799_2_191
Type: CAZyme
Location: 236120 - 238336 (+)
Type: CAZyme
Location: 236120 - 238336 (+)
Gene ID: HRGMv2_4799_2_192
Type:
Location: 238398 - 240041 (+)
Type:
Location: 238398 - 240041 (+)
Gene ID: HRGMv2_4799_2_193
Type: STP
Location: 240063 - 241451 (+)
Type: STP
Location: 240063 - 241451 (+)
Gene ID: HRGMv2_4799_2_194
Type: TC
Location: 241464 - 242267 (+)
Type: TC
Location: 241464 - 242267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.