Cluster: HRGMv2_4798_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4798
- CGC Family ID: CGCFAM_03112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4798_201 | HRGMv2_4798_201_24 | 21752 | 22501 | + | GT26 |
| pfam | HRGMv2_4798_201 | HRGMv2_4798_201_25 | 22501 | 23148 | + | PS_Dcarbxylase |
| pfam | HRGMv2_4798_201 | HRGMv2_4798_201_26 | 23149 | 23871 | + | CDP-OH_P_transf |
| CAZyme | HRGMv2_4798_201 | HRGMv2_4798_201_27 | 23868 | 25133 | + | GT2 |
| pfam | HRGMv2_4798_201 | HRGMv2_4798_201_28 | 25359 | 26336 | + | HlyD_3 | HlyD_D23 |
| NULL(UNKNOWN) | HRGMv2_4798_201 | HRGMv2_4798_201_29 | 26346 | 26594 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4798_201 | HRGMv2_4798_201_30 | 26591 | 29695 | + | 2.A.6.3.1 |
| pfam | HRGMv2_4798_201 | HRGMv2_4798_201_31 | 29784 | 30557 | + | SurE |
| pfam | HRGMv2_4798_201 | HRGMv2_4798_201_32 | 30699 | 31004 | + | Trns_repr_metal |
| TC | HRGMv2_4798_201 | HRGMv2_4798_201_33 | 31087 | 33849 | + | 3.A.3.5.15 |
Gene ID: HRGMv2_4798_201_24
Type: CAZyme
Location: 21752 - 22501 (+)
Type: CAZyme
Location: 21752 - 22501 (+)
Gene ID: HRGMv2_4798_201_25
Type: pfam
Location: 22501 - 23148 (+)
Type: pfam
Location: 22501 - 23148 (+)
Gene ID: HRGMv2_4798_201_26
Type: pfam
Location: 23149 - 23871 (+)
Type: pfam
Location: 23149 - 23871 (+)
Gene ID: HRGMv2_4798_201_27
Type: CAZyme
Location: 23868 - 25133 (+)
Type: CAZyme
Location: 23868 - 25133 (+)
Gene ID: HRGMv2_4798_201_28
Type: pfam
Location: 25359 - 26336 (+)
Type: pfam
Location: 25359 - 26336 (+)
Gene ID: HRGMv2_4798_201_29
Type:
Location: 26346 - 26594 (+)
Type:
Location: 26346 - 26594 (+)
Gene ID: HRGMv2_4798_201_30
Type: TC
Location: 26591 - 29695 (+)
Type: TC
Location: 26591 - 29695 (+)
Gene ID: HRGMv2_4798_201_31
Type: pfam
Location: 29784 - 30557 (+)
Type: pfam
Location: 29784 - 30557 (+)
Gene ID: HRGMv2_4798_201_32
Type: pfam
Location: 30699 - 31004 (+)
Type: pfam
Location: 30699 - 31004 (+)
Gene ID: HRGMv2_4798_201_33
Type: TC
Location: 31087 - 33849 (+)
Type: TC
Location: 31087 - 33849 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4798_201_26 | vegetarian > omnivore | 4.00578 | 0.02017 |
| HRGMv2_4798_201_32 | vegetarian > omnivore | 3.79706 | 0.02017 |