Cluster: HRGMv2_4797_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4797
- CGC Family ID: CGCFAM_00279
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4797_7 | HRGMv2_4797_7_2 | 345 | 824 | - | 3.D.1.8.1 |
| pfam | HRGMv2_4797_7 | HRGMv2_4797_7_3 | 858 | 1607 | - | SurE |
| CAZyme | HRGMv2_4797_7 | HRGMv2_4797_7_4 | 1609 | 2859 | - | GT2 |
| pfam | HRGMv2_4797_7 | HRGMv2_4797_7_5 | 2879 | 3550 | - | CDP-OH_P_transf |
| pfam | HRGMv2_4797_7 | HRGMv2_4797_7_6 | 3547 | 4185 | - | PS_Dcarbxylase |
| CAZyme | HRGMv2_4797_7 | HRGMv2_4797_7_7 | 4190 | 4927 | - | GT26 |
Gene ID: HRGMv2_4797_7_2
Type: TC
Location: 345 - 824 (-)
Type: TC
Location: 345 - 824 (-)
Gene ID: HRGMv2_4797_7_3
Type: pfam
Location: 858 - 1607 (-)
Type: pfam
Location: 858 - 1607 (-)
Gene ID: HRGMv2_4797_7_4
Type: CAZyme
Location: 1609 - 2859 (-)
Type: CAZyme
Location: 1609 - 2859 (-)
Gene ID: HRGMv2_4797_7_5
Type: pfam
Location: 2879 - 3550 (-)
Type: pfam
Location: 2879 - 3550 (-)
Gene ID: HRGMv2_4797_7_6
Type: pfam
Location: 3547 - 4185 (-)
Type: pfam
Location: 3547 - 4185 (-)
Gene ID: HRGMv2_4797_7_7
Type: CAZyme
Location: 4190 - 4927 (-)
Type: CAZyme
Location: 4190 - 4927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp958350005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.