Cluster: HRGMv2_4797_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4797
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4797_2 | HRGMv2_4797_2_34 | 38209 | 39336 | - | GT28 |
| pfam | HRGMv2_4797_2 | HRGMv2_4797_2_35 | 39369 | 40733 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_4797_2 | HRGMv2_4797_2_36 | 40782 | 41747 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4797_2_34
Type: CAZyme
Location: 38209 - 39336 (-)
Type: CAZyme
Location: 38209 - 39336 (-)
Gene ID: HRGMv2_4797_2_35
Type: pfam
Location: 39369 - 40733 (-)
Type: pfam
Location: 39369 - 40733 (-)
Gene ID: HRGMv2_4797_2_36
Type: TC
Location: 40782 - 41747 (-)
Type: TC
Location: 40782 - 41747 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp958350005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.