Cluster: HRGMv2_4797_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4797
- CGC Family ID: CGCFAM_01068
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4797_61 | HRGMv2_4797_61_3 | 983 | 1816 | + | 3.A.1.24.5 |
| STP | HRGMv2_4797_61 | HRGMv2_4797_61_4 | 1870 | 3033 | - | Aminotran_1_2 |
| peptidase | HRGMv2_4797_61 | HRGMv2_4797_61_5 | 3232 | 4476 | + | M20.UPD |
| TC | HRGMv2_4797_61 | HRGMv2_4797_61_6 | 4622 | 5617 | - | 2.A.28.2.4 |
| TC | HRGMv2_4797_61 | HRGMv2_4797_61_7 | 6240 | 8159 | + | 3.A.1.121.4 |
| CAZyme | HRGMv2_4797_61 | HRGMv2_4797_61_8 | 8459 | 9868 | + | AA4 |
Gene ID: HRGMv2_4797_61_3
Type: TC
Location: 983 - 1816 (+)
Type: TC
Location: 983 - 1816 (+)
Gene ID: HRGMv2_4797_61_4
Type: STP
Location: 1870 - 3033 (-)
Type: STP
Location: 1870 - 3033 (-)
Gene ID: HRGMv2_4797_61_5
Type: peptidase
Location: 3232 - 4476 (+)
Type: peptidase
Location: 3232 - 4476 (+)
Gene ID: HRGMv2_4797_61_6
Type: TC
Location: 4622 - 5617 (-)
Type: TC
Location: 4622 - 5617 (-)
Gene ID: HRGMv2_4797_61_7
Type: TC
Location: 6240 - 8159 (+)
Type: TC
Location: 6240 - 8159 (+)
Gene ID: HRGMv2_4797_61_8
Type: CAZyme
Location: 8459 - 9868 (+)
Type: CAZyme
Location: 8459 - 9868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp958350005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.