Cluster: HRGMv2_4797_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4797
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4797_53 | HRGMv2_4797_53_2 | 733 | 1470 | - | 9.B.20.1.4 |
| pfam | HRGMv2_4797_53 | HRGMv2_4797_53_3 | 1607 | 2617 | + | Acyl_transf_3 |
| TC | HRGMv2_4797_53 | HRGMv2_4797_53_4 | 2709 | 3302 | + | 9.B.27.2.5 |
| CAZyme | HRGMv2_4797_53 | HRGMv2_4797_53_5 | 3299 | 4858 | + | GT83 |
| CAZyme | HRGMv2_4797_53 | HRGMv2_4797_53_6 | 4871 | 6481 | + | GT83 |
Gene ID: HRGMv2_4797_53_2
Type: TC
Location: 733 - 1470 (-)
Type: TC
Location: 733 - 1470 (-)
Gene ID: HRGMv2_4797_53_3
Type: pfam
Location: 1607 - 2617 (+)
Type: pfam
Location: 1607 - 2617 (+)
Gene ID: HRGMv2_4797_53_4
Type: TC
Location: 2709 - 3302 (+)
Type: TC
Location: 2709 - 3302 (+)
Gene ID: HRGMv2_4797_53_5
Type: CAZyme
Location: 3299 - 4858 (+)
Type: CAZyme
Location: 3299 - 4858 (+)
Gene ID: HRGMv2_4797_53_6
Type: CAZyme
Location: 4871 - 6481 (+)
Type: CAZyme
Location: 4871 - 6481 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp958350005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.