Cluster: HRGMv2_4797_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4797
- CGC Family ID: CGCFAM_00036
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4797_52 | HRGMv2_4797_52_12 | 7267 | 8718 | + | 9.B.18.1.2 |
| pfam | HRGMv2_4797_52 | HRGMv2_4797_52_13 | 8797 | 9843 | + | Acyl_transf_3 |
| pfam | HRGMv2_4797_52 | HRGMv2_4797_52_14 | 9866 | 10975 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_4797_52 | HRGMv2_4797_52_15 | 11387 | 12202 | + | GT111 |
| CAZyme | HRGMv2_4797_52 | HRGMv2_4797_52_16 | 12304 | 13347 | + | GT2 |
| CAZyme | HRGMv2_4797_52 | HRGMv2_4797_52_17 | 13347 | 14489 | + | GT4 |
Gene ID: HRGMv2_4797_52_12
Type: TC
Location: 7267 - 8718 (+)
Type: TC
Location: 7267 - 8718 (+)
Gene ID: HRGMv2_4797_52_13
Type: pfam
Location: 8797 - 9843 (+)
Type: pfam
Location: 8797 - 9843 (+)
Gene ID: HRGMv2_4797_52_14
Type: pfam
Location: 9866 - 10975 (+)
Type: pfam
Location: 9866 - 10975 (+)
Gene ID: HRGMv2_4797_52_15
Type: CAZyme
Location: 11387 - 12202 (+)
Type: CAZyme
Location: 11387 - 12202 (+)
Gene ID: HRGMv2_4797_52_16
Type: CAZyme
Location: 12304 - 13347 (+)
Type: CAZyme
Location: 12304 - 13347 (+)
Gene ID: HRGMv2_4797_52_17
Type: CAZyme
Location: 13347 - 14489 (+)
Type: CAZyme
Location: 13347 - 14489 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp958350005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.