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Cluster: HRGMv2_4797_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4797_1 HRGMv2_4797_1_84 80724 81383 - 3.A.1.24.5
TC HRGMv2_4797_1 HRGMv2_4797_1_85 81380 82405 - 3.A.1.24.2
peptidase HRGMv2_4797_1 HRGMv2_4797_1_86 82398 83549 - M20.UPD
TC HRGMv2_4797_1 HRGMv2_4797_1_87 84056 86290 - 1.B.12.4.2
TC HRGMv2_4797_1 HRGMv2_4797_1_88 86673 88031 + 2.A.1.3.9
NULL(UNKNOWN) HRGMv2_4797_1 HRGMv2_4797_1_89 88138 88563 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4797_1 HRGMv2_4797_1_90 88626 90026 + AA4
pfam HRGMv2_4797_1 HRGMv2_4797_1_91 90110 91411 + Lar_N | LarA_C
CAZyme HRGMv2_4797_1 HRGMv2_4797_1_92 91473 93620 - GH123
TC HRGMv2_4797_1 HRGMv2_4797_1_93 93630 94682 - 3.A.1.1.16
STP HRGMv2_4797_1 HRGMv2_4797_1_94 94899 96173 + SBP_bac_1
STP HRGMv2_4797_1 HRGMv2_4797_1_95 96195 97478 + SBP_bac_1
TC HRGMv2_4797_1 HRGMv2_4797_1_96 97545 98402 + 3.A.1.1.19
TC HRGMv2_4797_1 HRGMv2_4797_1_97 98425 99270 + 3.A.1.1.25
Gene ID: HRGMv2_4797_1_84
Type: TC
Location: 80724 - 81383 (-)
Gene ID: HRGMv2_4797_1_85
Type: TC
Location: 81380 - 82405 (-)
Gene ID: HRGMv2_4797_1_86
Type: peptidase
Location: 82398 - 83549 (-)
Gene ID: HRGMv2_4797_1_87
Type: TC
Location: 84056 - 86290 (-)
Gene ID: HRGMv2_4797_1_88
Type: TC
Location: 86673 - 88031 (+)
Gene ID: HRGMv2_4797_1_89
Type:
Location: 88138 - 88563 (+)
Gene ID: HRGMv2_4797_1_90
Type: CAZyme
Location: 88626 - 90026 (+)
Gene ID: HRGMv2_4797_1_91
Type: pfam
Location: 90110 - 91411 (+)
Gene ID: HRGMv2_4797_1_92
Type: CAZyme
Location: 91473 - 93620 (-)
Gene ID: HRGMv2_4797_1_93
Type: TC
Location: 93630 - 94682 (-)
Gene ID: HRGMv2_4797_1_94
Type: STP
Location: 94899 - 96173 (+)
Gene ID: HRGMv2_4797_1_95
Type: STP
Location: 96195 - 97478 (+)
Gene ID: HRGMv2_4797_1_96
Type: TC
Location: 97545 - 98402 (+)
Gene ID: HRGMv2_4797_1_97
Type: TC
Location: 98425 - 99270 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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