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Cluster: HRGMv2_4795_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4795_26 HRGMv2_4795_26_1 187 804 + 2.A.87.2.3
TF HRGMv2_4795_26 HRGMv2_4795_26_2 991 2037 + 0043758
pfam HRGMv2_4795_26 HRGMv2_4795_26_3 2060 2635 + GrpE
TC HRGMv2_4795_26 HRGMv2_4795_26_4 2664 4544 + 1.A.33.1.4
sulfatase HRGMv2_4795_26 HRGMv2_4795_26_5 4560 5723 + S1_7
TF HRGMv2_4795_26 HRGMv2_4795_26_6 6455 7351 - HTH_1
TC HRGMv2_4795_26 HRGMv2_4795_26_7 7505 8389 - 2.A.115.1.1
TC HRGMv2_4795_26 HRGMv2_4795_26_8 9341 10750 + 9.B.18.1.2
CAZyme HRGMv2_4795_26 HRGMv2_4795_26_9 10821 11924 + GT4
Gene ID: HRGMv2_4795_26_1
Type: TC
Location: 187 - 804 (+)
Gene ID: HRGMv2_4795_26_2
Type: TF
Location: 991 - 2037 (+)
Gene ID: HRGMv2_4795_26_3
Type: pfam
Location: 2060 - 2635 (+)
Gene ID: HRGMv2_4795_26_4
Type: TC
Location: 2664 - 4544 (+)
Gene ID: HRGMv2_4795_26_5
Type: sulfatase
Location: 4560 - 5723 (+)
Gene ID: HRGMv2_4795_26_6
Type: TF
Location: 6455 - 7351 (-)
Gene ID: HRGMv2_4795_26_7
Type: TC
Location: 7505 - 8389 (-)
Gene ID: HRGMv2_4795_26_8
Type: TC
Location: 9341 - 10750 (+)
Gene ID: HRGMv2_4795_26_9
Type: CAZyme
Location: 10821 - 11924 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Dialisteraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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