Cluster: HRGMv2_4795_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4795
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4795_2 | HRGMv2_4795_2_40 | 42891 | 43961 | - | GT9 |
| STP | HRGMv2_4795_2 | HRGMv2_4795_2_41 | 43981 | 45432 | - | PfkB |
| CAZyme | HRGMv2_4795_2 | HRGMv2_4795_2_42 | 45514 | 46692 | - | GT4 |
| pfam | HRGMv2_4795_2 | HRGMv2_4795_2_43 | 46699 | 47682 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| TC | HRGMv2_4795_2 | HRGMv2_4795_2_44 | 47814 | 49010 | - | 2.A.1.2.20 |
Gene ID: HRGMv2_4795_2_40
Type: CAZyme
Location: 42891 - 43961 (-)
Type: CAZyme
Location: 42891 - 43961 (-)
Gene ID: HRGMv2_4795_2_41
Type: STP
Location: 43981 - 45432 (-)
Type: STP
Location: 43981 - 45432 (-)
Gene ID: HRGMv2_4795_2_42
Type: CAZyme
Location: 45514 - 46692 (-)
Type: CAZyme
Location: 45514 - 46692 (-)
Gene ID: HRGMv2_4795_2_43
Type: pfam
Location: 46699 - 47682 (-)
Type: pfam
Location: 46699 - 47682 (-)
Gene ID: HRGMv2_4795_2_44
Type: TC
Location: 47814 - 49010 (-)
Type: TC
Location: 47814 - 49010 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.