Cluster: HRGMv2_4795_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4795
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4795_1 | HRGMv2_4795_1_10 | 9363 | 10010 | + | 3.A.1.3.17 |
| TC | HRGMv2_4795_1 | HRGMv2_4795_1_11 | 10012 | 10740 | + | 3.A.1.3.24 |
| TF | HRGMv2_4795_1 | HRGMv2_4795_1_12 | 11057 | 11257 | + | CSD |
| pfam | HRGMv2_4795_1 | HRGMv2_4795_1_13 | 11480 | 12835 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_4795_1 | HRGMv2_4795_1_14 | 12849 | 13967 | + | GT28 |
Gene ID: HRGMv2_4795_1_10
Type: TC
Location: 9363 - 10010 (+)
Type: TC
Location: 9363 - 10010 (+)
Gene ID: HRGMv2_4795_1_11
Type: TC
Location: 10012 - 10740 (+)
Type: TC
Location: 10012 - 10740 (+)
Gene ID: HRGMv2_4795_1_12
Type: TF
Location: 11057 - 11257 (+)
Type: TF
Location: 11057 - 11257 (+)
Gene ID: HRGMv2_4795_1_13
Type: pfam
Location: 11480 - 12835 (+)
Type: pfam
Location: 11480 - 12835 (+)
Gene ID: HRGMv2_4795_1_14
Type: CAZyme
Location: 12849 - 13967 (+)
Type: CAZyme
Location: 12849 - 13967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.