Cluster: HRGMv2_4794_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4794
- CGC Family ID: CGCFAM_00279
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4794_12 | HRGMv2_4794_12_5 | 3319 | 4578 | - | GT2 |
| pfam | HRGMv2_4794_12 | HRGMv2_4794_12_6 | 4575 | 5291 | - | CDP-OH_P_transf |
| pfam | HRGMv2_4794_12 | HRGMv2_4794_12_7 | 5292 | 5942 | - | PS_Dcarbxylase |
| CAZyme | HRGMv2_4794_12 | HRGMv2_4794_12_8 | 6071 | 6814 | - | GT26 |
| STP | HRGMv2_4794_12 | HRGMv2_4794_12_9 | 6811 | 8268 | - | CBS | CBS |
| NULL(UNKNOWN) | HRGMv2_4794_12 | HRGMv2_4794_12_10 | 8834 | 25777 | - | NULL(UNKNOWN) |
| TC | HRGMv2_4794_12 | HRGMv2_4794_12_11 | 25826 | 27505 | - | 1.B.20.1.3 |
Gene ID: HRGMv2_4794_12_5
Type: CAZyme
Location: 3319 - 4578 (-)
Type: CAZyme
Location: 3319 - 4578 (-)
Gene ID: HRGMv2_4794_12_6
Type: pfam
Location: 4575 - 5291 (-)
Type: pfam
Location: 4575 - 5291 (-)
Gene ID: HRGMv2_4794_12_7
Type: pfam
Location: 5292 - 5942 (-)
Type: pfam
Location: 5292 - 5942 (-)
Gene ID: HRGMv2_4794_12_8
Type: CAZyme
Location: 6071 - 6814 (-)
Type: CAZyme
Location: 6071 - 6814 (-)
Gene ID: HRGMv2_4794_12_9
Type: STP
Location: 6811 - 8268 (-)
Type: STP
Location: 6811 - 8268 (-)
Gene ID: HRGMv2_4794_12_10
Type:
Location: 8834 - 25777 (-)
Type:
Location: 8834 - 25777 (-)
Gene ID: HRGMv2_4794_12_11
Type: TC
Location: 25826 - 27505 (-)
Type: TC
Location: 25826 - 27505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.