Cluster: HRGMv2_4794_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4794
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4794_3 | HRGMv2_4794_3_3 | 1376 | 2257 | + | CE4 |
| CAZyme | HRGMv2_4794_3 | HRGMv2_4794_3_4 | 2238 | 3071 | + | CE4 |
| STP | HRGMv2_4794_3 | HRGMv2_4794_3_5 | 3118 | 3951 | + | SBP_bac_3 |
| TC | HRGMv2_4794_3 | HRGMv2_4794_3_6 | 4022 | 4678 | + | 3.A.1.3.15 |
| TC | HRGMv2_4794_3 | HRGMv2_4794_3_7 | 4671 | 5396 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_4794_3_3
Type: CAZyme
Location: 1376 - 2257 (+)
Type: CAZyme
Location: 1376 - 2257 (+)
Gene ID: HRGMv2_4794_3_4
Type: CAZyme
Location: 2238 - 3071 (+)
Type: CAZyme
Location: 2238 - 3071 (+)
Gene ID: HRGMv2_4794_3_5
Type: STP
Location: 3118 - 3951 (+)
Type: STP
Location: 3118 - 3951 (+)
Gene ID: HRGMv2_4794_3_6
Type: TC
Location: 4022 - 4678 (+)
Type: TC
Location: 4022 - 4678 (+)
Gene ID: HRGMv2_4794_3_7
Type: TC
Location: 4671 - 5396 (+)
Type: TC
Location: 4671 - 5396 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.