Cluster: HRGMv2_4793_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4793
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4793_59 | HRGMv2_4793_59_2 | 571 | 1728 | - | GT2 |
| CAZyme | HRGMv2_4793_59 | HRGMv2_4793_59_3 | 1757 | 3577 | - | GT111 | GT8 |
| pfam | HRGMv2_4793_59 | HRGMv2_4793_59_4 | 3615 | 4739 | - | Glycos_transf_2 |
| pfam | HRGMv2_4793_59 | HRGMv2_4793_59_5 | 4739 | 5083 | - | Glft2_N |
| CAZyme | HRGMv2_4793_59 | HRGMv2_4793_59_6 | 5080 | 5850 | - | GT111 |
| pfam | HRGMv2_4793_59 | HRGMv2_4793_59_7 | 5882 | 6979 | - | GLF | NAD_binding_8 |
| TC | HRGMv2_4793_59 | HRGMv2_4793_59_8 | 6994 | 7275 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4793_59_2
Type: CAZyme
Location: 571 - 1728 (-)
Type: CAZyme
Location: 571 - 1728 (-)
Gene ID: HRGMv2_4793_59_3
Type: CAZyme
Location: 1757 - 3577 (-)
Type: CAZyme
Location: 1757 - 3577 (-)
Gene ID: HRGMv2_4793_59_4
Type: pfam
Location: 3615 - 4739 (-)
Type: pfam
Location: 3615 - 4739 (-)
Gene ID: HRGMv2_4793_59_5
Type: pfam
Location: 4739 - 5083 (-)
Type: pfam
Location: 4739 - 5083 (-)
Gene ID: HRGMv2_4793_59_6
Type: CAZyme
Location: 5080 - 5850 (-)
Type: CAZyme
Location: 5080 - 5850 (-)
Gene ID: HRGMv2_4793_59_7
Type: pfam
Location: 5882 - 6979 (-)
Type: pfam
Location: 5882 - 6979 (-)
Gene ID: HRGMv2_4793_59_8
Type: TC
Location: 6994 - 7275 (-)
Type: TC
Location: 6994 - 7275 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp010093125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.