Cluster: HRGMv2_4793_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4793
- CGC Family ID: CGCFAM_00329
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4793_43 | HRGMv2_4793_43_3 | 4586 | 6172 | + | 2.A.66.2.14 |
| pfam | HRGMv2_4793_43 | HRGMv2_4793_43_4 | 6182 | 7429 | + | MazG |
| pfam | HRGMv2_4793_43 | HRGMv2_4793_43_5 | 7505 | 7807 | + | Bac_DNA_binding | HU-HIG |
| CAZyme | HRGMv2_4793_43 | HRGMv2_4793_43_6 | 7979 | 9088 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_4793_43 | HRGMv2_4793_43_7 | 9230 | 9562 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4793_43 | HRGMv2_4793_43_8 | 9644 | 11602 | + | 3.A.1.120.6 |
Gene ID: HRGMv2_4793_43_3
Type: TC
Location: 4586 - 6172 (+)
Type: TC
Location: 4586 - 6172 (+)
Gene ID: HRGMv2_4793_43_4
Type: pfam
Location: 6182 - 7429 (+)
Type: pfam
Location: 6182 - 7429 (+)
Gene ID: HRGMv2_4793_43_5
Type: pfam
Location: 7505 - 7807 (+)
Type: pfam
Location: 7505 - 7807 (+)
Gene ID: HRGMv2_4793_43_6
Type: CAZyme
Location: 7979 - 9088 (+)
Type: CAZyme
Location: 7979 - 9088 (+)
Gene ID: HRGMv2_4793_43_7
Type:
Location: 9230 - 9562 (+)
Type:
Location: 9230 - 9562 (+)
Gene ID: HRGMv2_4793_43_8
Type: TC
Location: 9644 - 11602 (+)
Type: TC
Location: 9644 - 11602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp010093125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.