Cluster: HRGMv2_4792_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4792
- CGC Family ID: CGCFAM_08355
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4792_117 | HRGMv2_4792_117_14 | 12619 | 13278 | - | 9.B.124.1.7 |
| pfam | HRGMv2_4792_117 | HRGMv2_4792_117_15 | 13686 | 14204 | - | Zn_Ribbon_1 |
| TC | HRGMv2_4792_117 | HRGMv2_4792_117_16 | 14275 | 15030 | - | 9.B.124.1.3 |
| CAZyme | HRGMv2_4792_117 | HRGMv2_4792_117_17 | 15047 | 16216 | - | GH3 |
Gene ID: HRGMv2_4792_117_14
Type: TC
Location: 12619 - 13278 (-)
Type: TC
Location: 12619 - 13278 (-)
Gene ID: HRGMv2_4792_117_15
Type: pfam
Location: 13686 - 14204 (-)
Type: pfam
Location: 13686 - 14204 (-)
Gene ID: HRGMv2_4792_117_16
Type: TC
Location: 14275 - 15030 (-)
Type: TC
Location: 14275 - 15030 (-)
Gene ID: HRGMv2_4792_117_17
Type: CAZyme
Location: 15047 - 16216 (-)
Type: CAZyme
Location: 15047 - 16216 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp937981445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.