Cluster: HRGMv2_4792_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4792
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4792_16 | HRGMv2_4792_16_6 | 2750 | 3136 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_4792_16 | HRGMv2_4792_16_7 | 3237 | 3566 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4792_16 | HRGMv2_4792_16_8 | 3762 | 4337 | + | DSBA |
| TC | HRGMv2_4792_16 | HRGMv2_4792_16_9 | 4341 | 5114 | + | 3.A.1.120.4 |
| TC | HRGMv2_4792_16 | HRGMv2_4792_16_10 | 5338 | 6357 | + | 3.A.1.120.6 |
Gene ID: HRGMv2_4792_16_6
Type: CAZyme
Location: 2750 - 3136 (+)
Type: CAZyme
Location: 2750 - 3136 (+)
Gene ID: HRGMv2_4792_16_7
Type:
Location: 3237 - 3566 (+)
Type:
Location: 3237 - 3566 (+)
Gene ID: HRGMv2_4792_16_8
Type: pfam
Location: 3762 - 4337 (+)
Type: pfam
Location: 3762 - 4337 (+)
Gene ID: HRGMv2_4792_16_9
Type: TC
Location: 4341 - 5114 (+)
Type: TC
Location: 4341 - 5114 (+)
Gene ID: HRGMv2_4792_16_10
Type: TC
Location: 5338 - 6357 (+)
Type: TC
Location: 5338 - 6357 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp937981445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.