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Cluster: HRGMv2_4791_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4791_45 HRGMv2_4791_45_2 1642 3327 - GT9
STP HRGMv2_4791_45 HRGMv2_4791_45_3 3327 4160 - PfkB
pfam HRGMv2_4791_45 HRGMv2_4791_45_4 4231 4815 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_4791_45 HRGMv2_4791_45_5 4985 6340 - 2.A.6.2.25
TC HRGMv2_4791_45 HRGMv2_4791_45_6 6337 8121 - 2.A.6.2.22
TC HRGMv2_4791_45 HRGMv2_4791_45_7 8131 9306 - 2.A.6.2.5
Gene ID: HRGMv2_4791_45_2
Type: CAZyme
Location: 1642 - 3327 (-)
Gene ID: HRGMv2_4791_45_3
Type: STP
Location: 3327 - 4160 (-)
Gene ID: HRGMv2_4791_45_4
Type: pfam
Location: 4231 - 4815 (-)
Gene ID: HRGMv2_4791_45_5
Type: TC
Location: 4985 - 6340 (-)
Gene ID: HRGMv2_4791_45_6
Type: TC
Location: 6337 - 8121 (-)
Gene ID: HRGMv2_4791_45_7
Type: TC
Location: 8131 - 9306 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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